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The economics of synthetic biology

JOURNAL ARTICLE published January 2007 in Molecular Systems Biology

Authors: Joachim Henkel | Stephen M Maurer

https://doi.org/10.1038/msb4100161 Actions

Pan‐tissue analysis of allelic alternative polyadenylation suggests widespread functional regulation

JOURNAL ARTICLE published April 2020 in Molecular Systems Biology

Research funded by Science, Technology and Innovation Commission of Shenzhen Municipality (JCYJ20170307105752508,JCYJ20180504165804015) | National Natural Science Foundation of China (31861133013,31970601,31771443)

Authors: Yisheng Li | Bernhard Schaefke | Xudong Zou | Min Zhang | Florian Heyd | Wei Sun | Bin Zhang | Guipeng Li | Weizheng Liang | Yuhao He | Juexiao Zhou | Yunfei Li | Liang Fang | Yuhui Hu | Wei Chen

https://doi.org/10.15252/msb.20199367 Actions

Interactome disassembly during apoptosis occurs independent of caspase cleavage

JOURNAL ARTICLE published January 2017 in Molecular Systems Biology

Research funded by Canadian Institutes of Health Research (MOP‐77688) | Michael Smith Foundation for Health Research (5363) | National Health and Medical Research Council (APP1037373)

Authors: Nichollas E Scott | Lindsay D Rogers | Anna Prudova | Nat F Brown | Nikolaus Fortelny | Christopher M Overall | Leonard J Foster

https://doi.org/10.15252/msb.20167067 Actions

Lyapunov exponents and phase diagrams reveal multi‐factorial control over TRAIL‐induced apoptosis

JOURNAL ARTICLE published January 2011 in Molecular Systems Biology

Authors: Bree B Aldridge | Suzanne Gaudet | Douglas A Lauffenburger | Peter K Sorger

https://doi.org/10.1038/msb.2011.85 Actions

GPIomics: global analysis of glycosylphosphatidylinositol‐anchored molecules ofTrypanosoma cruzi

JOURNAL ARTICLE published January 2009 in Molecular Systems Biology

Authors: Ernesto S Nakayasu | Dmitry V Yashunsky | Lilian L Nohara | Ana Claudia T Torrecilhas | Andrei V Nikolaev | Igor C Almeida

https://doi.org/10.1038/msb.2009.13 Actions

Force‐ and length‐dependent catastrophe activities explain interphase microtubule organization in fission yeast

JOURNAL ARTICLE published January 2009 in Molecular Systems Biology

Authors: Dietrich Foethke | Tatyana Makushok | Damian Brunner | François Nédélec

https://doi.org/10.1038/msb.2008.76 Actions

A growth‐rate composition formula for the growth of E. coli on co‐utilized carbon substrates

JOURNAL ARTICLE published April 2015 in Molecular Systems Biology

Authors: Rutger Hermsen | Hiroyuki Okano | Conghui You | Nicole Werner | Terence Hwa

https://doi.org/10.15252/msb.20145537 Actions

Measuring glycolytic flux in single yeast cells with an orthogonal synthetic biosensor

JOURNAL ARTICLE published December 2019 in Molecular Systems Biology

Research funded by European Commission (613745,675585,642738,289995)

Authors: Francisca Monteiro | Georg Hubmann | Vakil Takhaveev | Silke R Vedelaar | Justin Norder | Johan Hekelaar | Joana Saldida | Athanasios Litsios | Hein J Wijma | Alexander Schmidt | Matthias Heinemann

https://doi.org/10.15252/msb.20199071 Actions

A system‐level model for the microbial regulatory genome

JOURNAL ARTICLE published July 2014 in Molecular Systems Biology

Authors: Aaron N Brooks | David J Reiss | Antoine Allard | Wei‐Ju Wu | Diego M Salvanha | Christopher L Plaisier | Sriram Chandrasekaran | Min Pan | Amardeep Kaur | Nitin S Baliga

https://doi.org/10.15252/msb.20145160 Actions

Reverse engineering a hierarchical regulatory network downstream of oncogenic KRAS

JOURNAL ARTICLE published January 2012 in Molecular Systems Biology

Authors: Iwona Stelniec‐Klotz | Stefan Legewie | Oleg Tchernitsa | Franziska Witzel | Bertram Klinger | Christine Sers | Hanspeter Herzel | Nils Blüthgen | Reinhold Schäfer

https://doi.org/10.1038/msb.2012.32 Actions

Nonsense‐mediated decay targets have multiple sequence‐related features that can inhibit translation

JOURNAL ARTICLE published January 2010 in Molecular Systems Biology

Authors: Zhenguo Zhang | Li Zhou | Landian Hu | Yufei Zhu | Heng Xu | Yang Liu | Xianfen Chen | Xianfu Yi | Xiangyin Kong | Laurence D Hurst

https://doi.org/10.1038/msb.2010.101 Actions

A systems‐level approach to mapping the telomere length maintenance gene circuitry

JOURNAL ARTICLE published January 2008 in Molecular Systems Biology

Authors: Rafi Shachar | Lior Ungar | Martin Kupiec | Eytan Ruppin | Roded Sharan

https://doi.org/10.1038/msb.2008.13 Actions

Recurrent patterns of DNA copy number alterations in tumors reflect metabolic selection pressures

JOURNAL ARTICLE published February 2017 in Molecular Systems Biology

Research funded by American Cancer Society (RSG‐12‐257‐01‐TBE) | Melanoma Research Alliance (20120279) | National Center for Advancing Translational Sciences (UL1TR000124) | Concern Foundation (CONquer CanCER Now Award) | National Cancer Institute (P50 CA086438,P01 CA168585,P50 CA086306,U19 AI067769)

Authors: Nicholas A Graham | Aspram Minasyan | Anastasia Lomova | Ashley Cass | Nikolas G Balanis | Michael Friedman | Shawna Chan | Sophie Zhao | Adrian Delgado | James Go | Lillie Beck | Christian Hurtz | Carina Ng | Rong Qiao | Johanna ten Hoeve | Nicolaos Palaskas | Hong Wu | Markus Müschen | Asha S Multani | Elisa Port | Steven M Larson | Nikolaus Schultz | Daniel Braas | Heather R Christofk | Ingo K Mellinghoff | Thomas G Graeber

https://doi.org/10.15252/msb.20167159 Actions

Can ACE 2 expression explain SARS ‐CoV‐2 infection of the respiratory epithelia in COVID ‐19?

JOURNAL ARTICLE published July 2020 in Molecular Systems Biology

Authors: Martijn C Nawijn | Wim Timens

https://doi.org/10.15252/msb.20209841 Actions

The circadian oscillator analysed at the single‐transcript level

JOURNAL ARTICLE published March 2021 in Molecular Systems Biology

Research funded by Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (310030_173079)

Authors: Nicholas E Phillips | Alice Hugues | Jake Yeung | Eric Durandau | Damien Nicolas | Felix Naef

https://doi.org/10.15252/msb.202010135 Actions

Novel peptide identification from tandem mass spectra using ESTs and sequence database compression

JOURNAL ARTICLE published January 2007 in Molecular Systems Biology

Authors: Nathan J Edwards

https://doi.org/10.1038/msb4100142 Actions

A modular network model of aging

JOURNAL ARTICLE published January 2007 in Molecular Systems Biology

Authors: Huiling Xue | Bo Xian | Dong Dong | Kai Xia | Shanshan Zhu | Zhongnan Zhang | Lei Hou | Qingpeng Zhang | Yi Zhang | Jing‐Dong J Han

https://doi.org/10.1038/msb4100189 Actions

Local signaling with molecular diffusion as a decoder of Ca 2+ signals in synaptic plasticity

JOURNAL ARTICLE published January 2005 in Molecular Systems Biology

Authors: Honda Naoki | Yuichi Sakumura | Shin Ishii

https://doi.org/10.1038/msb4100035 Actions

Theoretical and experimental analysis links isoform‐ specific ERK signalling to cell fate decisions

JOURNAL ARTICLE published January 2009 in Molecular Systems Biology

Authors: Marcel Schilling | Thomas Maiwald | Stefan Hengl | Dominic Winter | Clemens Kreutz | Walter Kolch | Wolf D Lehmann | Jens Timmer | Ursula Klingmüller

https://doi.org/10.1038/msb.2009.91 Actions

The population context is a driver of the heterogeneous response of epithelial cells to interferons

JOURNAL ARTICLE published 25 January 2024 in Molecular Systems Biology

Research funded by Deutsche Forschungsgemeinschaft (278001972,240245660) | UF | UF Health | College of Medicine, University of Florida (start-up package,start-up package)

Authors: Camila Metz-Zumaran | Zina M Uckeley | Patricio Doldan | Francesco Muraca | Yagmur Keser | Pascal Lukas | Benno Kuropka | Leonie Küchenhoff | Soheil Rastgou Talemi | Thomas Höfer | Christian Freund | Elisabetta Ada Cavalcanti-Adam | Frederik Graw | Megan Stanifer | Steeve Boulant

https://doi.org/10.1038/s44320-024-00011-2 Actions
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